Sains Malaysiana 48(5)(2019): 975–981

http://dx.doi.org/10.17576/jsm-2019-4805-05

 

Agronomical Screening of OGLE1040/TAM O-301 Oat Genetic Mapping Population

(Penyaringan Agronomi Pemetaan Populasi Genetik Oat OGLE1040/TAM O-301)

 

ZIYA DUMLUPINAR^1*, HÜSEYIN GÜNGÖR², TEVRICAN DOKUYUCU³, SEVGI HEREK³, ALI TEKIN¹ & AYDIN AKKAYA³

 

¹Kahramanmaras Sütçü İmam University, Agricultural Faculty, Agricultural Biotechnology Department, Kahramanmaras, Turkey

 

²Düzce University, Agriculture and Natural Sciences Faculty, Field Crops Department, Düzce, Turkey

 

³Kahramanmaras Sütçü İmam University, Agricultural Faculty, Field Crops Department, Kahramanmaras, Turkey

 

 

Received: 4 January 2018/Accepted: 16 March 2019

 

ABSTRACT

In recent years, mapping populations have provided improvements for oat genomic researches. A two-year study was conducted in East-Mediterranean conditions using Ogle1040/TAM O-301 pure-line mapping population including 136 individuals and parents. Stem diameter (SD), plant height (PH), panicle length (PL), vegetative period (VP), grain filling period (GFP), days to maturity (DM), grain number per panicle (GNP), grain weight per panicle (GWP), thousand kernel weight (TKW) and grain yield (GY) were investigated in 2014 and 2015 cropping seasons in Kahramanmaras. All the investigated traits were significantly different for years (p<0.01) and genotypes (p<0.05 and p<0.01) except SD and GNP. Genotype x year (G x Y) interaction was significant for PL, VP, GFP, DM and GY (p<0.01). In the first year, the average GY per row was 227.6 g, whilst it was 184.5 g in the second year. In terms of GY, the parents Ogle 1040 and TAM O-301 showed lower performance (154.5 and 111.5 g/row, respectively) compared to Ogle1040/TAM O-301 (OT) population average (206 g/row). OT129 genotype had the highest GY with 360 g/row. Principal component (PC) factor analysis yielded 10 PC explaining 100% of total variance in the data and the chi-square values of the PC1 to PC9 were found significant. According to PC biplot analysis, genotypes with high GY, TKW, GNP, GWP, PL and GFP were located throughout the right quadrants whereas the genotypes with high VP, DM and SD were located throughout the left quadrants. The relationships between PH × GY, GWP × GNP and GWP × TKW were positive and significant.

 

Keywords: Agronomic traits; biplot; mapping population; oat

 

ABSTRAK

Dalam tahun-tahun kebelakangan ini, pemetaan populasi telah memberikan penambahbaikan bagi penyelidikan genom oat. Kajian dua tahun telah dijalankan di kawasan Timur Mediterranean menggunakan pemetaan populasi Ogle1040/TAM O-301 termasuk 136 individu dan induk. Diameter batang (SD), tinggi tumbuhan (PH), panjang panikel (PL), tempoh vegetatif (VP), tempoh pengisian bijirin (GFP), hari kepada kematangan (DM), bilangan bijirin setiap panikel (GNP), berat bijirin setiap panikel (GWP), berat seribu kernel (TKW) dan hasil bijirin (GY) telah dikaji pada musim penanaman tahun 2014 dan 2015 di Kahramanmaras. Semua trait yang dikaji adalah berbeza secara signifikan daripada segi tahun (p<0.01) dan genotip (p<0.05 dan p<0.01) kecuali SD dan GNP. Interaksi genotip x tahun (G x Y) adalah signifikan bagi PL, VP, GFP, DM dan GY (p<0.01). Pada tahun pertama, purata GY setiap baris adalah 227.6 g, manakala 184.5 g pada tahun kedua. Daripada segi GY, induk Ogle 1040 dan TAM O-301 menunjukkan prestasi yang lebih rendah (masing-masing 154.5 dan 111.5 g) berbanding purata penduduk Ogle1040/TAM O-301 (OT) (206 g/row). Genotip OT129 mempunyai GY tertinggi dengan 360 g/baris. Analisis faktor komponen utama (PC) menghasilkan 10 PC menerangkan 100% daripada jumlah varians dalam data dan nilai khi kuasa dua PC1 hingga PC9 didapati signifikan. Menurut analisis biplot PC, genotip dengan GY tinggi, TKW, GNP, GWP, PL dan GFP terletak di seluruh kuadran kanan manakala genotip yang mempunyai VP, DM dan SD yang tinggi terletak di sepanjang kuadran kiri. Hubungan antara PH × GY, GWP × GNP dan GWP × TKW adalah positif dan signifikan.

 

Kata kunci: Biplot; oat; pemetaan populasi; trait agronomi

REFERENCES

Achleitner, A., Tinker, N.A., Zechner, E. & Buerstmayr, H. 2008. Genetic diversity among oat varieties of worldwide origin and associations of AFLP markers with quantitative. Theoretical and Applied Genetics 117: 1041-1053.

Ahmad, G., Ansar, M., Kalem, S., Nabi, G. & Hussain, M. 2008. Performance of early maturing oats (Avena sativa L.) cultivars for yield and quality. Journal of Agricultural Research 46: 341-346.

Baltenberger, D.C.C. & Frey, K.J. 1987. Genotypic variability in response of oat to delayed sowing. Agronomy Journal 79: 813-816.

Braaten, J.T., Wood, P.J., Scott, F.W., Wolynetz, M.S., Lowe, M.K., Bradley-White, P. & Collins, M.W. 1994. Oat beta-glucan reduces blood cholesterol concentration in hypercholesterolemic subjects. Eur. J. Clin. Nutr. 48: 465- 474.

Buerstmayr, H., Krenn, N., Stephan, U., Grausgruber, H. & Zechner, E. 2007. Agronomic performance and quality of oat (Avena sativa L.) genotypes of worldwide origin produced under Central European growing conditions. Field Crops Research 101: 343-351.

Doehlert, D.C., McMullen, M.S. & Hammond, J.J. 2001. Genotypic and environmental effects on grain yield and quality of oat grown in North Dakota. Crop Science 41: 1066-1072.

Dumlupinar, Z., Dokuyucu, T. & Akkaya, A. 2011. Evaluation of Turkish oat landraces based on grain yield, yield components and some quality traits. Turkish Journal of Field Crops 16: 190-196.

Dumlupinar, Z., Dokuyucu, T., Maral, H., Kara, R. & Akkaya, A. 2012a. Evaluation of Turkish oat landraces based on morphological and phenological traits. Zemdirbyste- Agriculture 99: 149-158.

Dumlupinar, Z., Kara, R., Dokuyucu, T. & Akkaya, A. 2012b. Correlation and path analysis of grain yield and yield components of some Turkish oat genotypes. Pakistan Journal of Botany 44(1): 321-325.

Eggum, B.O., Hansen, I. & Larsen, T. 1989. Protein quality and digestible energy of selected food determined in balanced trials with rats. Plant Foods for Human Nutrition 39: 13-21.

Federer, W.T. 2005. Augmented split block experiment design. Agronomy Journal 97: 578-586.

Gautam, S.K., Verma, A.K. & Vishwakarma, S.R. 2006. Genetic variability and association of morpho-physiological characters in oat (Avena sativa L.). Farm Science Journal 15: 82-83.

Hoffmann, L.A. 1995. World production and use of oats. In The Oat Crop-Production and Utilization, edited by Welch, R.W. London: Chapman and Hall.

Iverson, G.L. 2011. Z scores. In Encyclopedia of Clinical Neuropsychology, edited by Kreutzer J.S., DeLuca, J. & Caplan, B. New York: Springer.

Jackson, E.W., Obert, D.E., Avant, J.B., Harrison, S.A., Chong, J., Carson, M.L. & Bonman, J.M. 2010. Quantitative trait loci in the Ogle/TAM O-301 oat mapping population controlling resistance to Puccinia coronata in the field. Phytopathology 100: 484-492.

JMP. 2007. JMP User Guide, Release 7 Copyright© 2007, SAS Institute Inc. - Cary, USA.

Krishna, A., Ahmed, S., Pandey, H.C. & Kumar, V. 2014. Correlation, path and diversity analysis of oat (Avena sativa l.) genotypes for grain and fodder yield. Journal of Plant Science & Research 1(2): 1-9.

Locatelli, A.B., Federizzi, L.C., Milach, S.C.K. & McElroy, A.R. 2008. Flowering time in oat: Genotype characterization for photoperiod and vernalization response. Field Crops Research 106: 242-247.

Ma, Y., Liu, Z., Bai, Y., Wang, W. & Wang, H. 2006. Study on diversity of oats varieties in Xinjiang. Xinjiang Agricultural Sciences 6: 510-513.

MS Excel, Release 2013 Copyright© 2013. Microsoft Office Inc.

Matiello, R.R., Sereno, M.J.C.M., Neto, J.F.B., Carvalho, F.I.F., Pacheco, M.T., Pegoraro, D.G. & Taderka, I. 1999. Characterization for plant height and flowering date in the biological species Oat. Pesquisa Agropecuária Brasileira 34: 1393-1398.

Nawaz, N., Razzaq, A., Ali, Z., Sarwar, G. & Yousaf, M. 2004. Performance of different oat (Avena sativa L.) varieties under the agro-climatic conditions of Bahawalpur-Pakistan. International Journal of Agriculture and Biology 6: 624-626.

Oliver, R.E., Lazo, G.R., Lutz, J.D., Rubenfield, M.J., Tinker, N.A., Anderson, J.M., Wisniewski, N.H.M., Adhikary, D., Jellen, E.N., Maughan, P.J., Guedira, G.L.B., Chao, S., Beattie, A.D., Carson, M.L., Rines, H.W., Obert, D.E., Bonman, J.M. & Jackson, E.W. 2011a. Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology. BMC Genomics 12: 77.

Oliver, R.E., Jellen, E., Ladizinsky, G., Korol, A., Kilian, A., Larsen, B.J., Dumlupinar, Z., Wisniewski, M.N., Svedin, E., Coon, M., Redman, R., Maughan, P., Obert, D.E. & Jackson, E.W. 2011b. New DArT markers for tetraploid oat (Avena magna Murphy et Terrell) provide the first complete linkage map and markers linked to domestication genes from hexaploid A. sativa L. Theoretical and Applied Genetics 123: 1159-1171.

Peltonen-Sainio, P. & Rajala, A. 2007. Duration of vegetative and generative development phases in oat cultivars released since 1921. Field Crops Research 101: 72-79.

Peterson, D.M., Wesenberg, D.M., Burrup, D.E. & Erickson, C.A. 2005. Relationships among agronomic traits and grain composition in oat genotypes grown in different environments. Crop Science 45: 1249-1255.

Portyanko, V.A., Hoffman, D.L., Lee, M. & Holland, J.B. 2001. A linkage map of hexaploid oat based on grass anchor DNA clones and its relationship to other oat maps. Genome 44: 249-265.

Redaelli, R., Lagana, P., Rizza, F., Nicosia, O.L.D. & Cattivelli, L. 2008. Genetic progress of oats in Italy. Euphytica 164: 679-687.

Ren, C.Z., Ma, B.L., Burrows, V., Zhou, J., Hu, Y.G., Guo, L., Wei, L., Sha, L. & Deng, L. 2007. Evaluation of early mature naked oat varieties as a summer-seeded crop in dryland Northern climate regions. Field Crops Research 103: 248-254.

Robertson, L.D. & Frey, K.J. 1987. Honeycomb design for selection among homozygous oat lines. Crop Science 27: 1105-1108.

Tamn, I. 2003. Genetic and environmental variation of grain yield of oat varieties. Agronomy Research 1: 93-97.

Wych, R.D., McGraw, R.L. & Stuthman, D.D. 1982. Genotype × year interaction for length and rate of grain filling in oats. Crop Science 22: 1025-1028.

Yanming, M., Zhi, Y.L., Yu, T.B., Wei, W. & Hao, W. 2006. Study on diversity of oats varieties in Xinjiang. Xinjiang Agricultural Sciences 43: 510-513.

Zaman, Q., Hussain, M.N., Aziz, A. & Hayat, K. 2006. Performance of high yielding oat varieties under agro-ecological conditions of D. I. Khan. Journal of Agricultural Research 44: 29-35.

 

*Corresponding author; email: zdumlupinar@ksu.edu.tr