CRISPedia – CRISPR Interactive Site

Guided Learning

CRISPR Simulator

Choose your level

Each level unlocks more advanced CRISPR science. Complete levels in order.

Level 1

DNA Fundamentals

M1 · DNA Builder  +  M2 · Mutation Scanner

Learn how DNA is structured and how to identify mutations in a gene sequence.

Level 2

CRISPR Surgery

M3 · CRISPR-Cas9 Protocol

Perform a complete CRISPR-Cas9 editing procedure step by step — PAM site, guide RNA, off-target, cut.

Level 3

Design Your Own CRISPR

M4 · Custom gRNA Designer

Enter your own DNA target, design a guide RNA, run off-target analysis, and predict your edit outcome.

Level 1
DNA Fundamentals
Module 1 of 2

How to play: Drag a nucleotide from the palette onto an empty slot on Strand 2. A pairs with T; G pairs with C. Wrong drops turn red. Drag a filled slot back to the palette area to remove it.

Nucleotide Palette — drag to a slot below
A
T
G
C
A pairs T  |  G pairs C
Double Helix — drag nucleotides to fill Strand 2

How to play: Compare the reference sequence (top) with the patient sequence (bottom). Click every base in the patient sequence that differs from the reference. Wrong clicks shake red. Use "Reveal all" if stuck.

DNA Sequence (20-nt target + PAM)
Found: 0 / ?
Patient Sequence — identify the mutations
Level 2
CRISPR Surgery

How to play: Complete all 4 steps of the CRISPR-Cas9 protocol. Each step has a hint. Use the Back button to revisit any previous step.

1 · PAM Site 2 · Guide RNA 3 · Off-target 4 · Cut
0 pts
Level 3
Design Your Own CRISPR
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