CODA – Genomics & Transcriptomics

Genomics is the study of genomes, that is the complete set of DNA in an organism. The DNA encodes the genes that have its own function. Studying the genomes enable the researchers to better understand how genes interact with each other and gene variations that cause diseases.  

While the approach to study transcriptome, which is the entire set of RNA transcripts in an organism is called Transcriptomics. The study of transcriptome involves everything relating to RNAs including expression levels, gene regulation and gene interactions.

Next Generation Sequencing (NGS) is a high throughput sequencing technology that allows sequencing of DNA and RNA using different modern sequencing technologies. The example of this modern sequencing technologies include Illumina sequencing, Ion Torrent and 454 sequencing. This more cheaply and quickly technologies allow researcher to do revolutionary studies of genomics and transcriptomics. 

CODA Genomics & Transcriptomics provides NGS data analysis that starts from processing of raw data, transcriptome assembly (referenced or de novo), functional annotation, differentially expressed gene (DEG) analysis, as well as various downstream functional analyses to help users in comprehending the biological meaning from expression results.

TRANSCRIPTOME WORKFLOW

WHAT DO WE OFFER & PRICING DETAILS

TYPE OF ANALYSISCHARGES
Transcriptome analysis
– Pre-processing of raw data
– Transcriptome assembly (Referenced / de novo)
– Differential Expression analysis
– Functional Annotation
– Downstream analysis (Example : Molecular marker prediction; SNP/SSR)
RM 200 / 5 Gbp raw sequence data
​#Not inclusive of instrumental analytical services, subject to change according to customer needs.

ACHIEVEMENTS

PERSON IN CHARGE

Dr. Emelda Rosseleena Rohani

Research Plot Coordinator / Research Fellow

emelda@ukm.edu.my

Plant Tissue Culture and Functional Genomics

Intan Azlinda Ramlee

Science Officer / Bioinformatics Lab PIC / Webmaster

+603 8921 4560

intanazlinda@ukm.edu.my